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  5. Lsat_1_v5_gn_1_19200.1

Lsat_1_v5_gn_1_19200.1


Description : not classified


Gene families : OG0040527 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_19200.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_142


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006811 monoatomic ion transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006812 monoatomic cation transport IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008047 enzyme activator activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008483 transaminase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0010024 phytochromobilin biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0015079 potassium ion transmembrane transporter activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0016020 membrane IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0019867 outer membrane IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0033014 tetrapyrrole biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0036211 protein modification process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043648 dicarboxylic acid metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0050897 cobalt ion binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051202 phytochromobilin metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0070647 protein modification by small protein conjugation or removal IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071805 potassium ion transmembrane transport IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0140673 transcription elongation-coupled chromatin remodeling IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 14 99
IPR003340 B3_DNA-bd 231 317
IPR003340 B3_DNA-bd 440 535
No external refs found!