Lsat_1_v5_gn_1_123421.1 (TPS21, ATTPS21)

Aliases : TPS21, ATTPS21

Description : mono-/sesquiterpene-/diterpene synthase. EC_4.2 carbon-oxygen lyase

Gene families : OG0002452 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002452_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_123421.1
Cluster	Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_235

Target	Alias	Description	ECC score	Gene Family Method	Actions
Lsat_1_v5_gn_1_121241.1	No alias	EC_4.2 carbon-oxygen lyase....	0.01	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0010333	terpene synthase activity	IEA	Interproscan
MF	GO:0016829	lyase activity	IEA	Interproscan
MF	GO:0016835	carbon-oxygen lyase activity	None	Extended
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0008037	cell recognition	IEP	Lactuca Sativa GO terms from Neighborhoods
BP	GO:0048544	recognition of pollen	IEP	Lactuca Sativa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR005630	Terpene_synthase_metal-bd	237	502
IPR001906	Terpene_synth_N	31	206

External Links

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