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  5. Lsat_1_v5_gn_1_121241.1

Lsat_1_v5_gn_1_121241.1


Description : EC_4.2 carbon-oxygen lyase. mono-/sesquiterpene-/diterpene synthase


Gene families : OG0002452 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002452_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_121241.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_1_123421.1 TPS21, ATTPS21 mono-/sesquiterpene-/diterpene synthase. EC_4.2... 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
MF GO:0010333 terpene synthase activity IEA Interproscan
MF GO:0016829 lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0005506 iron ion binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006950 response to stress IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006952 defense response IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006979 response to oxidative stress IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016491 oxidoreductase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0020037 heme binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0046906 tetrapyrrole binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0050660 flavin adenine dinucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0050896 response to stimulus IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR005630 Terpene_synthase_metal-bd 238 502
IPR001906 Terpene_synth_N 31 206
No external refs found!