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  5. Lsat_1_v5_gn_1_117161.1

Lsat_1_v5_gn_1_117161.1 (MGO3, RPL30, BRU1, TSK)


Aliases : MGO3, RPL30, BRU1, TSK

Description : chromatin stabilizing factor *(TSK)


Gene families : OG0041117 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_117161.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_66


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003677 DNA binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0003682 chromatin binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006259 DNA metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006260 DNA replication IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006275 regulation of DNA replication IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006310 DNA recombination IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0008094 ATP-dependent activity, acting on DNA IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016462 pyrophosphatase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016887 ATP hydrolysis activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0022402 cell cycle process IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0031262 Ndc80 complex IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032392 DNA geometric change IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0032508 DNA duplex unwinding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0044877 protein-containing complex binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051052 regulation of DNA metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051276 chromosome organization IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0071103 DNA conformation change IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP Lactuca Sativa GO terms from Neighborhoods
CC GO:0180019 Knl1/Spc105 complex IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:1903047 mitotic cell cycle process IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR019734 TPR_repeat 166 194
IPR019734 TPR_repeat 70 103
IPR001611 Leu-rich_rpt 1086 1106
No external refs found!