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Aliases : NSUN5, AtTRM4h, TRM4h
Description : not classified
Gene families : OG0000316 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000316_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_1_100981.1 | |
| Cluster | Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_254 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Lsat_1_v5_gn_5_92240.1 | NSUN5, AtTRM4h, TRM4h | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003997 | acyl-CoA oxidase activity | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005047 | signal recognition particle binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0005048 | signal sequence binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0005777 | peroxisome | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0005786 | signal recognition particle, endoplasmic reticulum targeting | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006631 | fatty acid metabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0006635 | fatty acid beta-oxidation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0008312 | 7S RNA binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009062 | fatty acid catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0009606 | tropism | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0010274 | hydrotropism | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0016042 | lipid catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0016054 | organic acid catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0016634 | oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0019395 | fatty acid oxidation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0030258 | lipid modification | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0030942 | endoplasmic reticulum signal peptide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0034440 | lipid oxidation | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0042277 | peptide binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0042579 | microbody | IEP | Lactuca Sativa GO terms from Neighborhoods |
| MF | GO:0043021 | ribonucleoprotein complex binding | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0044242 | cellular lipid catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0046395 | carboxylic acid catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
| CC | GO:0048500 | signal recognition particle | IEP | Lactuca Sativa GO terms from Neighborhoods |
| BP | GO:0072329 | monocarboxylic acid catabolic process | IEP | Lactuca Sativa GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |