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  5. Lsat_1_v5_gn_0_43161.1

Lsat_1_v5_gn_0_43161.1 (AtRLP26, RLP26)


Aliases : AtRLP26, RLP26

Description : not classified


Gene families : OG0000056 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000056_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Lactuca sativa (Lsa) PCC: Lsat_1_v5_gn_0_43161.1
Cluster Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm): Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Lsat_1_v5_gn_3_16961.1 No alias not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_3_16981.1 RLP37, EMB2800, AtRLP37 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_3_93780.1 EMS1, EXS not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_4_85600.1 FLS2 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_4_85660.1 EMS1, EXS not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_8_138040.1 CIK4 not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_8_138300.1 No alias not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_8_140821.1 EMS1, EXS not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_8_157381.1 PRK1 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_8_157441.1 AtRLP52, RLP52 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_8_157700.1 No alias not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0000166 nucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004672 protein kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0004673 protein histidine kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006468 protein phosphorylation IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006793 phosphorus metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0006796 phosphate-containing compound metabolic process IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0008037 cell recognition IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016301 kinase activity IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0016310 phosphorylation IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0036211 protein modification process IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Lactuca Sativa GO terms from Neighborhoods
BP GO:0048544 recognition of pollen IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140096 catalytic activity, acting on a protein IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:0140299 small molecule sensor activity IEP Lactuca Sativa GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Lactuca Sativa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 412 450
IPR001611 Leu-rich_rpt 209 269
IPR001611 Leu-rich_rpt 558 617
IPR001611 Leu-rich_rpt 460 519
IPR001611 Leu-rich_rpt 134 190
IPR001611 Leu-rich_rpt 107 118
IPR013210 LRR_N_plant-typ 38 74
IPR001611 Leu-rich_rpt 783 804
No external refs found!