Mpzg00720.1 (RPOA)

Aliases : RPOA

Description : core component *(RpoA) of plastid-encoded RNA polymerase

Gene families : OG0009719 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Marchantia polymorpha (Mpo) PCC: Mpzg00720.1
Cluster	Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_153

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006351	DNA-templated transcription	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016779	nucleotidyltransferase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
MF	GO:0034062	5'-3' RNA polymerase activity	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046983	protein dimerization activity	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097747	RNA polymerase activity	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003954	NADH dehydrogenase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003955	NAD(P)H dehydrogenase (quinone) activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005575	cellular_component	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005730	nucleolus	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005840	ribosome	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006754	ATP biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008137	NADH dehydrogenase (ubiquinone) activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0009055	electron transfer activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0009521	photosystem	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0009522	photosystem I	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0009523	photosystem II	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0009579	thylakoid	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009767	photosynthetic electron transport chain	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0015453	oxidoreduction-driven active transmembrane transporter activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0015979	photosynthesis	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0015986	proton motive force-driven ATP synthesis	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016168	chlorophyll binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0019684	photosynthesis, light reaction	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0022900	electron transport chain	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0031361	obsolete integral component of thylakoid membrane	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0032991	protein-containing complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0043226	organelle	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0043228	non-membrane-bounded organelle	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0043229	intracellular organelle	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0046034	ATP metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0048038	quinone binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0050136	NADH dehydrogenase (quinone) activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0098796	membrane protein complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0110165	cellular anatomical entity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR011262	DNA-dir_RNA_pol_insert	70	159
IPR011263	DNA-dir_RNA_pol_RpoA/D/Rpb3	36	225
IPR011260	RNAP_asu_C	269	313

External Links

No external refs found!

Mpzg00720.1 (RPOA)

Expression Profile

Co-expression Networks

Functional Annotation