Mp8g05520.1

Description : RsmE-type rRNA methyltransferase

Gene families : OG0009798 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Marchantia polymorpha (Mpo) PCC: Mp8g05520.1
Cluster	Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_9

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006364	rRNA processing	IEA	Interproscan
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016072	rRNA metabolic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0000278	mitotic cell cycle	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0000775	chromosome, centromeric region	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006281	DNA repair	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006974	DNA damage response	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0007049	cell cycle	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008080	N-acetyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016407	acetyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016410	N-acyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0017076	purine nucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0032553	ribonucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0032555	purine ribonucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0033554	cellular response to stress	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0036094	small molecule binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0043168	anion binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051716	cellular response to stimulus	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0097367	carbohydrate derivative binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0098687	chromosomal region	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:1901265	nucleoside phosphate binding	IEP	Marchantia polymorpha GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR006700	RsmE	89	305

External Links

No external refs found!

Mp8g05520.1

Expression Profile

Co-expression Networks

Functional Annotation