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  5. Mp7g15670.1

Mp7g15670.1 (chr13, SRCAP, PIE1)


Aliases : chr13, SRCAP, PIE1

Description : ATPase component *(PIE1) of SWR1 chromatin remodeling complex


Gene families : OG0060152 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha (Mpo) PCC: Mp7g15670.1
Cluster Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_9


Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000176 nuclear exosome (RNase complex) IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0000178 exosome (RNase complex) IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0000375 RNA splicing, via transesterification reactions IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0000398 mRNA splicing, via spliceosome IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003729 mRNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004527 exonuclease activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005509 calcium ion binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005685 U1 snRNP IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006325 chromatin organization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006338 chromatin remodeling IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006376 mRNA splice site recognition IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006397 mRNA processing IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008270 zinc ion binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008380 RNA splicing IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008408 3'-5' exonuclease activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0022618 protein-RNA complex assembly IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0031491 nucleosome binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0043015 gamma-tubulin binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043933 protein-containing complex organization IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0071824 protein-DNA complex organization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0071826 protein-RNA complex organization IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0097525 spliceosomal snRNP complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0120114 Sm-like protein family complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:1905354 exoribonuclease complex IEP Marchantia polymorpha GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001650 Helicase_C 1774 1885
IPR014012 HSA_dom 429 495
IPR000330 SNF2_N 1243 1517
No external refs found!