- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : LHCB2, LHCB2.2
Description : component *(LHCb1/2/3) of LHC-II complex
Gene families : OG0000322 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000322_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Marchantia polymorpha (Mpo) PCC: Mp7g06740.1 | |
| Cluster | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_63 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004853 | uroporphyrinogen decarboxylase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0008171 | O-methyltransferase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0009522 | photosystem I | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0009538 | photosystem I reaction center | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0010277 | chlorophyllide a oxygenase [overall] activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0015994 | chlorophyll metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0015995 | chlorophyll biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0016226 | iron-sulfur cluster assembly | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016703 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016831 | carboxy-lyase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0042440 | pigment metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0046148 | pigment biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0046406 | magnesium protoporphyrin IX methyltransferase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0051540 | metal cluster binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022796 | Chloroa_b-bind | 64 | 229 |
| No external refs found! |