Mp7g01860.1 (EMB2296)


Aliases : EMB2296

Description : component *(uL2) of large ribosomal-subunit (LSU) proteome


Gene families : OG0000375 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000375_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha (Mpo) PCC: Mp7g01860.1
Cluster Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_58

Target Alias Description ECC score Gene Family Method Actions
Bra010550 No alias component *(uL2) of large ribosomal-subunit (LSU) proteome 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Bra011664 EMB2296 component *(uL2) of large ribosomal-subunit (LSU) proteome 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Bra017749 EMB2296 component *(uL2) of large ribosomal-subunit (LSU) proteome 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Bra039911 EMB2296 component *(uL2) of large ribosomal-subunit (LSU) proteome 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_5_4380.1 EMB2296 component *(uL2) of large ribosomal-subunit (LSU) proteome 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_9_94880.1 EMB2296 component *(uL2) of large ribosomal-subunit (LSU) proteome 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.00337 No alias component *(uL2) of large ribosomal-subunit (LSU) proteome 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.00075 No alias component *(uL2) of large ribosomal-subunit (LSU) proteome 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003746 translation elongation factor activity IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005730 nucleolus IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006383 transcription by RNA polymerase III IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006414 translational elongation IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0015934 large ribosomal subunit IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016409 palmitoyltransferase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0019843 rRNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0042254 ribosome biogenesis IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0044391 ribosomal subunit IEP Marchantia polymorpha GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR022669 Ribosomal_uL2_C 98 230
IPR022666 Ribosomal_uL2_RNA-bd_dom 14 90
No external refs found!