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Aliases : RPOB
Description : not classified
Gene families : OG0000474 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000474_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Marchantia polymorpha (Mpo) PCC: Mp6g21490.1 | |
| Cluster | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_40 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Spov3_C0091.00006 | RPOB | core component *(RpoB) of plastid-encoded RNA polymerase | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003954 | NADH dehydrogenase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003955 | NAD(P)H dehydrogenase (quinone) activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0004359 | glutaminase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0005198 | structural molecule activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0005215 | transporter activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0005575 | cellular_component | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0005840 | ribosome | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006081 | cellular aldehyde metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006412 | translation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006518 | peptide metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006754 | ATP biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0008137 | NADH dehydrogenase (ubiquinone) activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0008150 | biological_process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0008152 | metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0009055 | electron transfer activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009058 | biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009117 | nucleotide metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0009521 | photosystem | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0009522 | photosystem I | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0009523 | photosystem II | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0009579 | thylakoid | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009767 | photosynthetic electron transport chain | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009987 | cellular process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0015453 | oxidoreduction-driven active transmembrane transporter activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0015979 | photosynthesis | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016168 | chlorophyll binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016491 | oxidoreductase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0019637 | organophosphate metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0019684 | photosynthesis, light reaction | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0022857 | transmembrane transporter activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0022900 | electron transport chain | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0030684 | preribosome | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0030688 | preribosome, small subunit precursor | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0031361 | obsolete integral component of thylakoid membrane | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0032991 | protein-containing complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0042254 | ribosome biogenesis | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0042816 | vitamin B6 metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0042819 | vitamin B6 biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0042822 | pyridoxal phosphate metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0042823 | pyridoxal phosphate biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0043226 | organelle | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0043229 | intracellular organelle | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0043603 | amide metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0043604 | amide biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0044085 | cellular component biogenesis | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0044237 | cellular metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0046034 | ATP metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0046184 | aldehyde biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0048038 | quinone binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0050136 | NADH dehydrogenase (quinone) activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0051287 | NAD binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0072524 | pyridine-containing compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0072525 | pyridine-containing compound biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0098796 | membrane protein complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0110165 | cellular anatomical entity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |