Mp6g17130.1 (RRC1)

Aliases : RRC1

Description : snRNP-associated protein *(SR140)

Gene families : OG0018924 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Marchantia polymorpha (Mpo) PCC: Mp6g17130.1
Cluster	Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_37

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003678	DNA helicase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003916	DNA topoisomerase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003917	DNA topoisomerase type I (single strand cut, ATP-independent) activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005515	protein binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005543	phospholipid binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005667	transcription regulator complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005669	transcription factor TFIID complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005694	chromosome	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006265	DNA topological change	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006352	DNA-templated transcription initiation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006479	protein methylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006606	protein import into nucleus	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006913	nucleocytoplasmic transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008134	transcription factor binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0008213	protein alkylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0010024	phytochromobilin biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0016570	histone modification	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0016571	histone methylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016636	oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0017025	TBP-class protein binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0018022	peptidyl-lysine methylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0018024	obsolete histone lysine N-methyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0018130	heterocycle biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0018193	peptidyl-amino acid modification	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0018205	peptidyl-lysine modification	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0030014	CCR4-NOT complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0030145	manganese ion binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0032259	methylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0032774	RNA biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0033365	protein localization to organelle	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0034504	protein localization to nucleus	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0034968	histone lysine methylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0035091	phosphatidylinositol binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0043167	ion binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043414	macromolecule methylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043648	dicarboxylic acid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043650	dicarboxylic acid biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043687	post-translational protein modification	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0050897	cobalt ion binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051169	nuclear transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051170	import into nucleus	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051202	phytochromobilin metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0071103	DNA conformation change	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0072594	establishment of protein localization to organelle	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0090575	RNA polymerase II transcription regulator complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0140296	general transcription initiation factor binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0140513	nuclear protein-containing complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000061	Surp	366	418
IPR000504	RRM_dom	218	290

External Links

No external refs found!

Mp6g17130.1 (RRC1)

Expression Profile

Co-expression Networks

Functional Annotation