Mp6g06170.1 (NRPC2)

Aliases : NRPC2

Description : component *(NRPC2) of RNA polymerase III complex

Gene families : OG0057717 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Marchantia polymorpha (Mpo) PCC: Mp6g06170.1
Cluster	Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_28

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006351	DNA-templated transcription	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016779	nucleotidyltransferase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
MF	GO:0034062	5'-3' RNA polymerase activity	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097747	RNA polymerase activity	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000045	autophagosome assembly	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0000139	Golgi membrane	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0000166	nucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0000724	double-strand break repair via homologous recombination	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0000725	recombinational repair	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0003352	regulation of cilium movement	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003697	single-stranded DNA binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003774	cytoskeletal motor activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003777	microtubule motor activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004000	adenosine deaminase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004386	helicase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005338	nucleotide-sugar transmembrane transporter activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005515	protein binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005524	ATP binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005643	nuclear pore	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005783	endoplasmic reticulum	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005875	microtubule associated complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006066	alcohol metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006281	DNA repair	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006302	double-strand break repair	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006310	DNA recombination	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006457	protein folding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006488	dolichol-linked oligosaccharide biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006490	oligosaccharide-lipid intermediate biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006974	DNA damage response	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0007017	microtubule-based process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0007018	microtubule-based movement	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0007033	vacuole organization	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0015165	pyrimidine nucleotide-sugar transmembrane transporter activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0015780	nucleotide-sugar transmembrane transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0016093	polyprenol metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0017056	structural constituent of nuclear pore	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0017076	purine nucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0019239	deaminase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0019348	dolichol metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0030286	dynein complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0030554	adenyl nucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0030677	ribonuclease P complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0032553	ribonucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0032555	purine ribonucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0032886	regulation of microtubule-based process	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0032991	protein-containing complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0033554	cellular response to stress	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0036094	small molecule binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0043167	ion binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0043168	anion binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0051082	unfolded protein binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051716	cellular response to stimulus	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0060632	regulation of microtubule-based movement	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0070925	organelle assembly	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0090481	pyrimidine nucleotide-sugar transmembrane transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0097367	carbohydrate derivative binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0098588	bounding membrane of organelle	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0140657	ATP-dependent activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1901264	carbohydrate derivative transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:1901265	nucleoside phosphate binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:1902494	catalytic complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:1902555	endoribonuclease complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1905037	autophagosome organization	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:1905348	endonuclease complex	IEP	Marchantia polymorpha GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR007641	RNA_pol_Rpb2_7	1099	1189
IPR007642	RNA_pol_Rpb2_2	229	407
IPR007646	RNA_pol_Rpb2_4	584	643
IPR007645	RNA_pol_Rpb2_3	483	547
IPR007644	RNA_pol_bsu_protrusion	74	452
IPR007120	DNA-dir_RNAP_su2_dom	713	1097
IPR007647	RNA_pol_Rpb2_5	666	706

External Links

No external refs found!

Mp6g06170.1 (NRPC2)

Expression Profile

Co-expression Networks

Functional Annotation