Mp5g21260.1 (NRPD2A, DMS2, DRD2,...)

Aliases : NRPD2A, DMS2, DRD2, NRPE2, NRPD2, OCP1

Description : component *(NRPD2) of RNA polymerase IV complex. component *(NRPE2) of RNA polymerase V complex

Gene families : OG0057007 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Marchantia polymorpha (Mpo) PCC: Mp5g21260.1
Cluster	Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_87

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006351	DNA-templated transcription	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016779	nucleotidyltransferase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
MF	GO:0034062	5'-3' RNA polymerase activity	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097747	RNA polymerase activity	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000723	telomere maintenance	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003678	DNA helicase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005524	ATP binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005634	nucleus	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005694	chromosome	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006996	organelle organization	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0007030	Golgi organization	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0007275	multicellular organism development	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009056	catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009057	macromolecule catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009143	nucleoside triphosphate catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0016043	cellular component organization	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0018995	host cellular component	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0030554	adenyl nucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0030880	RNA polymerase complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0032200	telomere organization	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0032501	multicellular organismal process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0032502	developmental process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0033643	host cell part	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0033646	host intracellular part	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0033647	host intracellular organelle	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0033648	host intracellular membrane-bounded organelle	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0042025	host cell nucleus	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0046434	organophosphate catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0047429	nucleoside triphosphate diphosphatase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0048856	anatomical structure development	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051276	chromosome organization	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0071840	cellular component organization or biogenesis	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1901292	nucleoside phosphate catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1901575	organic substance catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR007644	RNA_pol_bsu_protrusion	439	826
IPR007646	RNA_pol_Rpb2_4	952	1017
IPR007120	DNA-dir_RNAP_su2_dom	1101	1465
IPR007645	RNA_pol_Rpb2_3	854	914
IPR007647	RNA_pol_Rpb2_5	1043	1093
IPR007641	RNA_pol_Rpb2_7	1467	1559
IPR007642	RNA_pol_Rpb2_2	621	779

External Links

No external refs found!

Mp5g21260.1 (NRPD2A, DMS2, DRD2,...)

Expression Profile

Co-expression Networks

Functional Annotation