Mp5g13570.1 (ABCB29, ATH12, ATATH12)

Aliases : ABCB29, ATH12, ATATH12

Description : heavy chain of Dynein microtubule-based motor protein complex

Gene families : OG0009802 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Marchantia polymorpha (Mpo) PCC: Mp5g13570.1
Cluster	Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_77

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003774	cytoskeletal motor activity	None	Extended
MF	GO:0003777	microtubule motor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005875	microtubule associated complex	None	Extended
BP	GO:0007017	microtubule-based process	None	Extended
BP	GO:0007018	microtubule-based movement	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
CC	GO:0030286	dynein complex	IEA	Interproscan
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
CC	GO:1902494	catalytic complex	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000139	Golgi membrane	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003676	nucleic acid binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003678	DNA helicase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003909	DNA ligase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003911	DNA ligase (NAD+) activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003980	UDP-glucose:glycoprotein glucosyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004478	methionine adenosyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005215	transporter activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005338	nucleotide-sugar transmembrane transporter activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005783	endoplasmic reticulum	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005856	cytoskeleton	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006400	tRNA modification	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006556	S-adenosylmethionine biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008192	RNA guanylyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008193	tRNA guanylyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0015165	pyrimidine nucleotide-sugar transmembrane transporter activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0015780	nucleotide-sugar transmembrane transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0015931	nucleobase-containing compound transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016462	pyrophosphatase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0016469	proton-transporting two-sector ATPase complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0016471	vacuolar proton-transporting V-type ATPase complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016787	hydrolase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016886	ligase activity, forming phosphoric ester bonds	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016887	ATP hydrolysis activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0022804	active transmembrane transporter activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0022857	transmembrane transporter activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0033176	proton-transporting V-type ATPase complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0044272	sulfur compound biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0046500	S-adenosylmethionine metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0055085	transmembrane transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0070403	NAD+ binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0070568	guanylyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0090481	pyrimidine nucleotide-sugar transmembrane transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0098588	bounding membrane of organelle	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1901264	carbohydrate derivative transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:1904949	ATPase complex	IEP	Marchantia polymorpha GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR035706	AAA_9	3008	3228
IPR041589	DNAH3_AAA_lid_1	2217	2305
IPR041466	Dynein_AAA5_ext	1876	1997
IPR041228	Dynein_C	3763	4066
IPR024743	Dynein_HC_stalk	2633	2975
IPR035699	AAA_6	1376	1702
IPR041658	AAA_lid_11	3594	3757
IPR013602	Dynein_heavy_linker	844	1247
IPR004273	Dynein_heavy_D6_P-loop	3473	3593
IPR024317	Dynein_heavy_chain_D4_dom	2360	2619

External Links

No external refs found!

Mp5g13570.1 (ABCB29, ATH12, ATATH12)

Expression Profile

Co-expression Networks

Functional Annotation