Mp5g10670.1

Description : tRNA dihydrouridine synthase

Gene families : OG0056235 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Marchantia polymorpha (Mpo) PCC: Mp5g10670.1
Cluster	Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_108

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008033	tRNA processing	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	None	Extended
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	None	Extended
MF	GO:0017150	tRNA dihydrouridine synthase activity	IEA	Interproscan
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0050660	flavin adenine dinucleotide binding	IEA	Interproscan
BP	GO:0055114	obsolete oxidation-reduction process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0106413	RNA dihydrouridine synthase activity	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003682	chromatin binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003747	translation release factor activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003993	acid phosphatase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005509	calcium ion binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005542	folic acid binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006415	translational termination	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006457	protein folding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006766	vitamin metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006771	riboflavin metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008079	translation termination factor activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008113	peptide-methionine (S)-S-oxide reductase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008703	5-amino-6-(5-phosphoribosylamino)uracil reductase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009110	vitamin biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009231	riboflavin biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0009521	photosystem	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0009523	photosystem II	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0010277	chlorophyllide a oxygenase [overall] activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0015979	photosynthesis	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016782	transferase activity, transferring sulphur-containing groups	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0019898	extrinsic component of membrane	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0022411	cellular component disassembly	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0031406	carboxylic acid binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0032984	protein-containing complex disassembly	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0033218	amide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0035596	methylthiotransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0042726	flavin-containing compound metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0042727	flavin-containing compound biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0043177	organic acid binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0044283	small molecule biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0044877	protein-containing complex binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0050497	alkylthioltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0051536	iron-sulfur cluster binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0051539	4 iron, 4 sulfur cluster binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0051540	metal cluster binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0072341	modified amino acid binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:1990204	oxidoreductase complex	IEP	Marchantia polymorpha GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001269	DUS_fam	150	436

External Links

No external refs found!

Mp5g10670.1

Expression Profile

Co-expression Networks

Functional Annotation