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  5. Mp5g09580.1

Mp5g09580.1 (RH39)


Aliases : RH39

Description : 23S-rRNA maturation helicase *(RH39)


Gene families : OG0056145 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha (Mpo) PCC: Mp5g09580.1
Cluster Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_102


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003735 structural constituent of ribosome IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003824 catalytic activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005198 structural molecule activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005216 monoatomic ion channel activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005261 monoatomic cation channel activity IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005840 ribosome IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006090 pyruvate metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006096 glycolytic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006164 purine nucleotide biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006284 base-excision repair IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006325 chromatin organization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006334 nucleosome assembly IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006338 chromatin remodeling IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006412 translation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006518 peptide metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006576 biogenic amine metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006595 polyamine metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006596 polyamine biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006597 spermine biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006694 steroid biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006754 ATP biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008150 biological_process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008152 metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008202 steroid metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008215 spermine metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008216 spermidine metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008295 spermidine biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009058 biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009141 nucleoside triphosphate metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009150 purine ribonucleotide metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009259 ribonucleotide metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009260 ribonucleotide biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009308 amine metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009309 amine biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0015252 proton channel activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0015986 proton motive force-driven ATP synthesis IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016052 carbohydrate catabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016229 steroid dehydrogenase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016829 lyase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016830 carbon-carbon lyase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016831 carboxy-lyase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016832 aldehyde-lyase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016874 ligase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0019104 DNA N-glycosylase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0019693 ribose phosphate metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0019843 rRNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0032993 protein-DNA complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034728 nucleosome organization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0042401 biogenic amine biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043043 peptide biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043228 non-membrane-bounded organelle IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043603 amide metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043604 amide biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044249 cellular biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0046034 ATP metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0046390 ribose phosphate biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0065004 protein-DNA complex assembly IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0071824 protein-DNA complex organization IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0071949 FAD binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0072522 purine-containing compound biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901362 organic cyclic compound biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901564 organonitrogen compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901566 organonitrogen compound biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901576 organic substance biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 131 314
IPR001650 Helicase_C 350 463
No external refs found!