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  5. Mp4g21620.1

Mp4g21620.1 (UPL1)


Aliases : UPL1

Description : E3 ubiquitin ligase *(UPL1)


Gene families : OG0055272 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha (Mpo) PCC: Mp4g21620.1
Cluster Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_9


Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0000375 RNA splicing, via transesterification reactions IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0000398 mRNA splicing, via spliceosome IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004527 exonuclease activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005488 binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005543 phospholipid binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005777 peroxisome IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006397 mRNA processing IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006904 vesicle docking involved in exocytosis IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008134 transcription factor binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0017025 TBP-class protein binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0022406 membrane docking IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0031072 heat shock protein binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0035091 phosphatidylinositol binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0042255 ribosome assembly IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0042256 cytosolic ribosome assembly IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0042579 microbody IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0043021 ribonucleoprotein complex binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0043022 ribosome binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0048278 vesicle docking IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051640 organelle localization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0070925 organelle assembly IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0140029 exocytic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0140056 organelle localization by membrane tethering IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0140296 general transcription initiation factor binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0140694 non-membrane-bounded organelle assembly IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Marchantia polymorpha GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000569 HECT_dom 3634 3944
IPR010309 E3_Ub_ligase_DUF908 208 366
IPR010309 E3_Ub_ligase_DUF908 85 205
IPR025527 HUWE1/Rev1_UBM 2857 2888
IPR025527 HUWE1/Rev1_UBM 2781 2808
IPR025527 HUWE1/Rev1_UBM 2817 2848
IPR010314 E3_Ub_ligase_DUF913 427 798
IPR015940 UBA 1319 1355
No external refs found!