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Aliases : atBRX1-1
Description : assembly factor involved in ITS1 rRNA removal *(BRIX1)
Gene families : OG0054012 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Marchantia polymorpha (Mpo) PCC: Mp4g04670.1 | |
| Cluster | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_9 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000154 | rRNA modification | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0000166 | nucleotide binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0001510 | RNA methylation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0001522 | pseudouridine synthesis | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003674 | molecular_function | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003676 | nucleic acid binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003724 | RNA helicase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003725 | double-stranded RNA binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0004386 | helicase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0005244 | voltage-gated monoatomic ion channel activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0005247 | voltage-gated chloride channel activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0005253 | monoatomic anion channel activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0005254 | chloride channel activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0005488 | binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0005515 | protein binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0005524 | ATP binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0005634 | nucleus | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0005730 | nucleolus | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0005732 | sno(s)RNA-containing ribonucleoprotein complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006364 | rRNA processing | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006396 | RNA processing | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006820 | monoatomic anion transport | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006821 | chloride transport | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0008134 | transcription factor binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0008168 | methyltransferase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0008186 | ATP-dependent activity, acting on RNA | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0008308 | voltage-gated monoatomic anion channel activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0008509 | monoatomic anion transmembrane transporter activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0008649 | rRNA methyltransferase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009451 | RNA modification | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009987 | cellular process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0015108 | chloride transmembrane transporter activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0016070 | RNA metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0016072 | rRNA metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016435 | rRNA (guanine) methyltransferase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016853 | isomerase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0017076 | purine nucleotide binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0022832 | voltage-gated channel activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0022836 | gated channel activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0022839 | monoatomic ion gated channel activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0030684 | preribosome | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0031123 | RNA 3'-end processing | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0031124 | mRNA 3'-end processing | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0031167 | rRNA methylation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0032040 | small-subunit processome | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0032553 | ribonucleotide binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0034457 | Mpp10 complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0034470 | ncRNA processing | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0036094 | small molecule binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0036265 | RNA (guanine-N7)-methylation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0042254 | ribosome biogenesis | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0042274 | ribosomal small subunit biogenesis | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0043168 | anion binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0043226 | organelle | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0043229 | intracellular organelle | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0044085 | cellular component biogenesis | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0044237 | cellular metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0070475 | rRNA base methylation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0070476 | rRNA (guanine-N7)-methylation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0140657 | ATP-dependent activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007109 | Brix | 54 | 246 |
| No external refs found! |