Mp4g03530.1 (EMB3142, EDS4)

Aliases : EMB3142, EDS4

Description : DNA polymerase eta *(POLH)

Gene families : OG0053927 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Marchantia polymorpha (Mpo) PCC: Mp4g03530.1
Cluster	Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_18

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003684	damaged DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	DNA damage response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003689	DNA clamp loader activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004334	fumarylacetoacetase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004411	homogentisate 1,2-dioxygenase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004425	indole-3-glycerol-phosphate synthase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004797	thymidine kinase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005663	DNA replication factor C complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006558	L-phenylalanine metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006559	L-phenylalanine catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006570	tyrosine metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006743	ubiquinone metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006744	ubiquinone biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008483	transaminase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009063	amino acid catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009072	aromatic amino acid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009074	aromatic amino acid family catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0016054	organic acid catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016822	hydrolase activity, acting on acid carbon-carbon bonds	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016823	hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016830	carbon-carbon lyase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016832	aldehyde-lyase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0019136	deoxynucleoside kinase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0019205	nucleobase-containing compound kinase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0019206	nucleoside kinase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0042180	cellular ketone metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0042181	ketone biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0042393	histone binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0046395	carboxylic acid catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0050661	NADP binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0051287	NAD binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1901606	alpha-amino acid catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1901661	quinone metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1901663	quinone biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1902221	erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1902222	erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR024728	PolY_HhH_motif	222	252
IPR017961	DNA_pol_Y-fam_little_finger	293	414
IPR001126	UmuC	15	208

External Links

No external refs found!

Mp4g03530.1 (EMB3142, EDS4)

Expression Profile

Co-expression Networks

Functional Annotation