Mp4g01750.1 (RPS6, RPS6A, AtRPS6)

Aliases : RPS6, RPS6A, AtRPS6

Description : component *(eS6) of small ribosomal-subunit (SSU) proteome

Gene families : OG0001186 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001186_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Marchantia polymorpha (Mpo) PCC: Mp4g01750.1
Cluster	Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_58

Target	Alias	Description	ECC score	Gene Family Method
Bra009039	RPS6B, EMB3010	component *(eS6) of small ribosomal-subunit (SSU) proteome	0.01	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Bra010227	RPS6, RPS6A, AtRPS6	component *(eS6) of small ribosomal-subunit (SSU) proteome	0.01	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_2_117041.1	RPS6, RPS6A, AtRPS6	component *(eS6) of small ribosomal-subunit (SSU) proteome	0.01	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_2_117061.1	RPS6, RPS6A, AtRPS6	component *(eS6) of small ribosomal-subunit (SSU) proteome	0.01	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0005991	trehalose metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0005992	trehalose biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006354	DNA-templated transcription elongation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006368	transcription elongation by RNA polymerase II	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006553	lysine metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006694	steroid biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006743	ubiquinone metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006744	ubiquinone biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0007062	sister chromatid cohesion	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0007064	mitotic sister chromatid cohesion	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0008023	transcription elongation factor complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008097	5S rRNA binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0008202	steroid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008839	4-hydroxy-tetrahydrodipicolinate reductase	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009085	lysine biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009089	lysine biosynthetic process via diaminopimelate	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0022402	cell cycle process	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0031390	Ctf18 RFC-like complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0042180	cellular ketone metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0042181	ketone biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043648	dicarboxylic acid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0044283	small molecule biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0046351	disaccharide biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0046451	diaminopimelate metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0070449	elongin complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0140513	nuclear protein-containing complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1901661	quinone metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1901663	quinone biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001377	Ribosomal_eS6	1	128

External Links

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Mp4g01750.1 (RPS6, RPS6A, AtRPS6)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation