- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : not classified
Gene families : OG0053516 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Marchantia polymorpha (Mpo) PCC: Mp3g23710.1 | |
| Cluster | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_9 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003674 | molecular_function | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003676 | nucleic acid binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003729 | mRNA binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0004386 | helicase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0005488 | binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0005515 | protein binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0005524 | ATP binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0005685 | U1 snRNP | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006325 | chromatin organization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006338 | chromatin remodeling | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006367 | transcription initiation at RNA polymerase II promoter | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006376 | mRNA splice site recognition | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006396 | RNA processing | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006397 | mRNA processing | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009987 | cellular process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0016043 | cellular component organization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0016070 | RNA metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0016071 | mRNA metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0016579 | protein deubiquitination | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0017076 | purine nucleotide binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0022607 | cellular component assembly | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0022618 | protein-RNA complex assembly | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0031123 | RNA 3'-end processing | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0031124 | mRNA 3'-end processing | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0031491 | nucleosome binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0032553 | ribonucleotide binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0036094 | small molecule binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0042255 | ribosome assembly | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0042256 | cytosolic ribosome assembly | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0042274 | ribosomal small subunit biogenesis | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0043021 | ribonucleoprotein complex binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0043022 | ribosome binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0043167 | ion binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0043168 | anion binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0043687 | post-translational protein modification | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0043933 | protein-containing complex organization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0044085 | cellular component biogenesis | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0044877 | protein-containing complex binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0070646 | protein modification by small protein removal | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0070925 | organelle assembly | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0071826 | protein-RNA complex organization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0120114 | Sm-like protein family complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0140657 | ATP-dependent activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0140694 | non-membrane-bounded organelle assembly | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |