Mp3g04260.1 (AtGEN1, GEN1)


Aliases : AtGEN1, GEN1

Description : canonical Holliday junction resolvase *(GEN1)


Gene families : OG0052023 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha (Mpo) PCC: Mp3g04260.1
Cluster Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_5


Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003677 DNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003684 damaged DNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003909 DNA ligase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003910 DNA ligase (ATP) activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004559 alpha-mannosidase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005048 signal sequence binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005488 binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005634 nucleus IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005643 nuclear pore IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006259 DNA metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006281 DNA repair IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006284 base-excision repair IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006302 double-strand break repair IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006310 DNA recombination IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006351 DNA-templated transcription IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006479 protein methylation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006621 protein retention in ER lumen IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006950 response to stress IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006974 DNA damage response IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008213 protein alkylation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009059 macromolecule biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0015923 mannosidase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016409 palmitoyltransferase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016571 histone methylation IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016763 pentosyltransferase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016779 nucleotidyltransferase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0018022 peptidyl-lysine methylation IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0018024 obsolete histone lysine N-methyltransferase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0018130 heterocycle biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0018205 peptidyl-lysine modification IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0019438 aromatic compound biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0032507 maintenance of protein location in cell IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0032774 RNA biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0033218 amide binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0033554 cellular response to stress IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0034062 5'-3' RNA polymerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034968 histone lysine methylation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0042277 peptide binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043227 membrane-bounded organelle IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043231 intracellular membrane-bounded organelle IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0045185 maintenance of protein location IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0046923 ER retention sequence binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0050896 response to stimulus IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051235 maintenance of location IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051651 maintenance of location in cell IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051716 cellular response to stimulus IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0072595 maintenance of protein localization in organelle IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0097747 RNA polymerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901362 organic cyclic compound biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Marchantia polymorpha GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006086 XPG-I_dom 132 219
IPR006085 XPG_DNA_repair_N 1 93
No external refs found!