Mp3g02070.1


Description : SSU processome assembly factor *(IMP3)


Gene families : OG0051865 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha (Mpo) PCC: Mp3g02070.1
Cluster Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_85


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0019843 rRNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0000154 rRNA modification IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0000166 nucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0001510 RNA methylation IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003677 DNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006177 GMP biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006351 DNA-templated transcription IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006364 rRNA processing IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006399 tRNA metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006418 tRNA aminoacylation for protein translation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006520 amino acid metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008173 RNA methyltransferase activity IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0008303 caspase complex IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008649 rRNA methyltransferase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009123 nucleoside monophosphate metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016072 rRNA metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016435 rRNA (guanine) methyltransferase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016779 nucleotidyltransferase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016874 ligase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0018130 heterocycle biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0019438 aromatic compound biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0030490 maturation of SSU-rRNA IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0030515 snoRNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0031167 rRNA methylation IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0032774 RNA biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0034062 5'-3' RNA polymerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034470 ncRNA processing IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0036265 RNA (guanine-N7)-methylation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0042254 ribosome biogenesis IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0042765 GPI-anchor transamidase complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043038 amino acid activation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043039 tRNA aminoacylation IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043414 macromolecule methylation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044281 small molecule metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0046037 GMP metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0070475 rRNA base methylation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0070476 rRNA (guanine-N7)-methylation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0097747 RNA polymerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0140101 catalytic activity, acting on a tRNA IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0140102 catalytic activity, acting on a rRNA IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901362 organic cyclic compound biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:1905368 peptidase complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:1905369 endopeptidase complex IEP Marchantia polymorpha GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001912 Ribosomal_uS4_N 4 61
IPR002942 S4_RNA-bd 107 153
No external refs found!