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  5. Mp2g15900.1

Mp2g15900.1 (NLE, AtNLE)


Aliases : NLE, AtNLE

Description : LSU processome assembly factor *(NLE)


Gene families : OG0050845 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha (Mpo) PCC: Mp2g15900.1
Cluster Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_9


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003724 RNA helicase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005575 cellular_component IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005730 nucleolus IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006364 rRNA processing IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008134 transcription factor binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008152 metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008186 ATP-dependent activity, acting on RNA IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0009521 photosystem IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0009522 photosystem I IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0009523 photosystem II IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0009579 thylakoid IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009767 photosynthetic electron transport chain IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0015979 photosynthesis IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016072 rRNA metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016168 chlorophyll binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016859 cis-trans isomerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0019684 photosynthesis, light reaction IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0022900 electron transport chain IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0031123 RNA 3'-end processing IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0031124 mRNA 3'-end processing IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0032977 membrane insertase activity IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034470 ncRNA processing IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0042254 ribosome biogenesis IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0042274 ribosomal small subunit biogenesis IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043226 organelle IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043228 non-membrane-bounded organelle IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043229 intracellular organelle IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044085 cellular component biogenesis IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0048038 quinone binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0071840 cellular component organization or biogenesis IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0098796 membrane protein complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0110165 cellular anatomical entity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0140104 molecular carrier activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0140597 protein carrier chaperone IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Marchantia polymorpha GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR012972 NLE 20 72
IPR001680 WD40_rpt 100 137
IPR001680 WD40_rpt 188 227
IPR001680 WD40_rpt 357 389
IPR001680 WD40_rpt 394 430
IPR001680 WD40_rpt 231 267
IPR001680 WD40_rpt 145 179
IPR001680 WD40_rpt 441 472
No external refs found!