- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : COG3
Description : regulatory factor *(RIQ) of thylakoid grana stacking
Gene families : OG0049541 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Marchantia polymorpha (Mpo) PCC: Mp1g29140.1 | |
| Cluster | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_63 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0004109 | coproporphyrinogen oxidase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0004853 | uroporphyrinogen decarboxylase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006766 | vitamin metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006771 | riboflavin metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0008104 | protein localization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0008531 | riboflavin kinase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009058 | biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009231 | riboflavin biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0015031 | protein transport | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0015994 | chlorophyll metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0015995 | chlorophyll biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0016226 | iron-sulfur cluster assembly | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016634 | oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016829 | lyase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016831 | carboxy-lyase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016853 | isomerase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0018208 | peptidyl-proline modification | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0033036 | macromolecule localization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0042440 | pigment metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0042726 | flavin-containing compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0044237 | cellular metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0045184 | establishment of protein localization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0046148 | pigment biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0046406 | magnesium protoporphyrin IX methyltransferase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0051641 | cellular localization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0070727 | cellular macromolecule localization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0071702 | organic substance transport | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0071705 | nitrogen compound transport | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR009500 | DUF1118 | 92 | 204 |
| No external refs found! |