Mp1g23970.1 (AtSAP60, EMB2776,...)


Aliases : AtSAP60, EMB2776, PRP4, LIS, AtPRP4

Description : component *(PRPF4) of spliceosomal U4/U6 snRNP


Gene families : OG0018437 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha (Mpo) PCC: Mp1g23970.1
Cluster Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_9


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003724 RNA helicase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004386 helicase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005634 nucleus IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005730 nucleolus IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008134 transcription factor binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008186 ATP-dependent activity, acting on RNA IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0010181 FMN binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016853 isomerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016859 cis-trans isomerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0031123 RNA 3'-end processing IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0031124 mRNA 3'-end processing IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0032977 membrane insertase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0042254 ribosome biogenesis IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0042274 ribosomal small subunit biogenesis IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043227 membrane-bounded organelle IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043231 intracellular membrane-bounded organelle IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044085 cellular component biogenesis IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0071840 cellular component organization or biogenesis IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0140104 molecular carrier activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0140597 protein carrier chaperone IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0140657 ATP-dependent activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Marchantia polymorpha GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR014906 PRP4-like 149 176
IPR001680 WD40_rpt 421 452
IPR001680 WD40_rpt 499 537
IPR001680 WD40_rpt 374 410
IPR001680 WD40_rpt 327 369
IPR001680 WD40_rpt 542 579
IPR001680 WD40_rpt 460 494
No external refs found!