Aliases : SMA1
Description : RNA helicase *(SMA1)
Gene families : OG0005612 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0005612_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Marchantia polymorpha (Mpo) PCC: Mp1g21580.1 | |
Cluster | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_129 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0002097 | tRNA wobble base modification | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0002098 | tRNA wobble uridine modification | IEP | Marchantia polymorpha GO terms from Neighborhoods |
MF | GO:0003712 | transcription coregulator activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
MF | GO:0003916 | DNA topoisomerase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
MF | GO:0003917 | DNA topoisomerase type I (single strand cut, ATP-independent) activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
MF | GO:0004402 | histone acetyltransferase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
MF | GO:0004674 | protein serine/threonine kinase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
MF | GO:0005515 | protein binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
MF | GO:0005516 | calmodulin binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
CC | GO:0005667 | transcription regulator complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
CC | GO:0005669 | transcription factor TFIID complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0006265 | DNA topological change | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0006352 | DNA-templated transcription initiation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0006396 | RNA processing | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0006400 | tRNA modification | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0006401 | RNA catabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0006402 | mRNA catabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0006473 | protein acetylation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0006475 | internal protein amino acid acetylation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0006479 | protein methylation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0006605 | protein targeting | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0006606 | protein import into nucleus | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0006623 | protein targeting to vacuole | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0006886 | intracellular protein transport | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0006913 | nucleocytoplasmic transport | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0007034 | vacuolar transport | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0008104 | protein localization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
MF | GO:0008134 | transcription factor binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0008152 | metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0008213 | protein alkylation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
MF | GO:0008270 | zinc ion binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0009890 | negative regulation of biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0009892 | negative regulation of metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0010629 | negative regulation of gene expression | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0015031 | protein transport | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0016070 | RNA metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0016570 | histone modification | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0016571 | histone methylation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0016573 | histone acetylation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0016579 | protein deubiquitination | IEP | Marchantia polymorpha GO terms from Neighborhoods |
MF | GO:0017025 | TBP-class protein binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0018022 | peptidyl-lysine methylation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
MF | GO:0018024 | obsolete histone lysine N-methyltransferase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0018205 | peptidyl-lysine modification | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0018394 | peptidyl-lysine acetylation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0019439 | aromatic compound catabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0032259 | methylation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0033036 | macromolecule localization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0033365 | protein localization to organelle | IEP | Marchantia polymorpha GO terms from Neighborhoods |
CC | GO:0033588 | elongator holoenzyme complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0034504 | protein localization to nucleus | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0034968 | histone lysine methylation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0036211 | protein modification process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0043170 | macromolecule metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0043412 | macromolecule modification | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0043414 | macromolecule methylation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0043543 | protein acylation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0043687 | post-translational protein modification | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0044238 | primary metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0045184 | establishment of protein localization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0046483 | heterocycle metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0046700 | heterocycle catabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0046907 | intracellular transport | IEP | Marchantia polymorpha GO terms from Neighborhoods |
MF | GO:0046914 | transition metal ion binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0051169 | nuclear transport | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0051170 | import into nucleus | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0051276 | chromosome organization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0051641 | cellular localization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0051649 | establishment of localization in cell | IEP | Marchantia polymorpha GO terms from Neighborhoods |
MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
MF | GO:0070001 | aspartic-type peptidase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0070646 | protein modification by small protein removal | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0070727 | cellular macromolecule localization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0071103 | DNA conformation change | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0071702 | organic substance transport | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0071704 | organic substance metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0071705 | nitrogen compound transport | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0072594 | establishment of protein localization to organelle | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0072665 | protein localization to vacuole | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0072666 | establishment of protein localization to vacuole | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
MF | GO:0140296 | general transcription initiation factor binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
MF | GO:0140993 | histone modifying activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
BP | GO:1901361 | organic cyclic compound catabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
No external refs found! |