Mp1g12810.1 (RRP5)


Aliases : RRP5

Description : SSU processome assembly factor *(RRP5)


Gene families : OG0048135 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha (Mpo) PCC: Mp1g12810.1
Cluster Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_82


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006397 mRNA processing IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0000166 nucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003678 DNA helicase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003747 translation release factor activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003774 cytoskeletal motor activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003777 microtubule motor activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003909 DNA ligase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003911 DNA ligase (NAD+) activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004386 helicase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005856 cytoskeleton IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006415 translational termination IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006479 protein methylation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0007017 microtubule-based process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0007018 microtubule-based movement IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008079 translation termination factor activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008213 protein alkylation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009890 negative regulation of biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0009975 cyclase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0009976 tocopherol cyclase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0010629 negative regulation of gene expression IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0015399 primary active transmembrane transporter activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0015931 nucleobase-containing compound transport IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016570 histone modification IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016571 histone methylation IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016779 nucleotidyltransferase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0018022 peptidyl-lysine methylation IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0018024 obsolete histone lysine N-methyltransferase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0018205 peptidyl-lysine modification IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0022411 cellular component disassembly IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0022804 active transmembrane transporter activity IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0030286 dynein complex IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0030515 snoRNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0031047 regulatory ncRNA-mediated gene silencing IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0032984 protein-containing complex disassembly IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0033176 proton-transporting V-type ATPase complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034968 histone lysine methylation IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0042254 ribosome biogenesis IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0098588 bounding membrane of organelle IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0140097 catalytic activity, acting on DNA IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0140657 ATP-dependent activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901264 carbohydrate derivative transport IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:1904949 ATPase complex IEP Marchantia polymorpha GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR008847 Suf 1883 1982
IPR003029 S1_domain 1303 1368
IPR003029 S1_domain 541 613
IPR003029 S1_domain 632 700
IPR003029 S1_domain 1506 1579
IPR003029 S1_domain 1111 1171
IPR003029 S1_domain 811 882
No external refs found!