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Aliases : UPF3, ATUPF3
Description : component *(UPF3) of RNA quality control Exon Junction complex
Gene families : OG0047512 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Marchantia polymorpha (Mpo) PCC: Mp1g05590.1 | |
| Cluster | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_115 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0000776 | kinetochore | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0004652 | obsolete polynucleotide adenylyltransferase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0005515 | protein binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0005534 | galactose binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006401 | RNA catabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006402 | mRNA catabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009056 | catabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009890 | negative regulation of biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0010207 | photosystem II assembly | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0016043 | cellular component organization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0019899 | enzyme binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0022607 | cellular component assembly | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0034508 | centromere complex assembly | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0043631 | obsolete RNA polyadenylation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0043933 | protein-containing complex organization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0046700 | heterocycle catabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0048029 | monosaccharide binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0071824 | protein-DNA complex organization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0099080 | supramolecular complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:1901575 | organic substance catabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005120 | UPF3_dom | 27 | 193 |
| No external refs found! |