Mp1g03870.1 (SVR11, RAB8D,...)

Aliases : SVR11, RAB8D, ATRAB8D, ATRABE1B, RABE1b

Description : translation elongation factor *(EF-Tu)

Gene families : OG0002164 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002164_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Marchantia polymorpha (Mpo) PCC: Mp1g03870.1
Cluster	Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_30

Target	Alias	Description	ECC score	Gene Family Method	Actions
Bra013458	SVR11, RAB8D,...	translation elongation factor *(EF-Tu)	0.01	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003735	structural constituent of ribosome	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003747	translation release factor activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004332	fructose-bisphosphate aldolase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004555	alpha,alpha-trehalase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004827	proline-tRNA ligase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004853	uroporphyrinogen decarboxylase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005198	structural molecule activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005840	ribosome	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0005991	trehalose metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006072	glycerol-3-phosphate metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006082	organic acid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006091	generation of precursor metabolites and energy	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006399	tRNA metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006412	translation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006415	translational termination	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006433	prolyl-tRNA aminoacylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006518	peptide metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006520	amino acid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006771	riboflavin metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006807	nitrogen compound metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008079	translation termination factor activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0008104	protein localization	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008135	translation factor activity, RNA binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0008150	biological_process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0008152	metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008531	riboflavin kinase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009058	biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009059	macromolecule biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009231	riboflavin biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0009507	chloroplast	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0009522	photosystem I	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0009536	plastid	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009767	photosynthetic electron transport chain	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009987	cellular process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0015031	protein transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0015927	trehalase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0016070	RNA metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016830	carbon-carbon lyase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016832	aldehyde-lyase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016859	cis-trans isomerase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016874	ligase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0019752	carboxylic acid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0022411	cellular component disassembly	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0022900	electron transport chain	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0032984	protein-containing complex disassembly	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0033036	macromolecule localization	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0034660	ncRNA metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0042726	flavin-containing compound metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0042727	flavin-containing compound biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043038	amino acid activation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043039	tRNA aminoacylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043043	peptide biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0043226	organelle	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0043228	non-membrane-bounded organelle	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0043229	intracellular organelle	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043436	oxoacid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043603	amide metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043604	amide biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043933	protein-containing complex organization	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0044237	cellular metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0044249	cellular biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0044281	small molecule metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0045182	translation regulator activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0045184	establishment of protein localization	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0046168	glycerol-3-phosphate catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0046434	organophosphate catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0046483	heterocycle metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051641	cellular localization	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0052646	alditol phosphate metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0070727	cellular macromolecule localization	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0071702	organic substance transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0071704	organic substance metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0071705	nitrogen compound transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0110165	cellular anatomical entity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1901576	organic substance biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR004161	EFTu-like_2	314	382
IPR000795	T_Tr_GTP-bd_dom	89	290
IPR004160	Transl_elong_EFTu/EF1A_C	387	486

External Links

No external refs found!

Mp1g03870.1 (SVR11, RAB8D,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation