Mp1g00290.1 (AtPMS1, PMS1)

Aliases : AtPMS1, PMS1

Description : component *(PMS1) of MLH1-PMS1 heterodimer

Gene families : OG0047061 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Marchantia polymorpha (Mpo) PCC: Mp1g00290.1
Cluster	Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_174

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	None	Extended
BP	GO:0006298	mismatch repair	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	DNA damage response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0030983	mismatched DNA binding	IEA	Interproscan
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003712	transcription coregulator activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004402	histone acetyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004555	alpha,alpha-trehalase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0005975	carbohydrate metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0005984	disaccharide metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0005985	sucrose metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0005991	trehalose metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0007275	multicellular organism development	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009311	oligosaccharide metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009790	embryo development	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009793	embryo development ending in seed dormancy	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0009975	cyclase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0009976	tocopherol cyclase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0015927	trehalase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016157	sucrose synthase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0022414	reproductive process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0032501	multicellular organismal process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0032502	developmental process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0034212	peptide N-acetyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0048856	anatomical structure development	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0061733	peptide-lysine-N-acetyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0140110	transcription regulator activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0140993	histone modifying activity	IEP	Marchantia polymorpha GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR014790	MutL_C	839	956
IPR013507	DNA_mismatch_S5_2-like	219	337

External Links

No external refs found!

Mp1g00290.1 (AtPMS1, PMS1)

Expression Profile

Co-expression Networks

Functional Annotation