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  5. Spov3_chr6.02905

Spov3_chr6.02905 (PAL2, ATPAL2)


Aliases : PAL2, ATPAL2

Description : not classified


Gene families : OG0000102 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000102_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr6.02905
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_97

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0005.00026 ASHR2, SDG39 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0016.00042 CSTF50 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0563.00001 PAL2, ATPAL2 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_S03.00015 PAL2, ATPAL2 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.02785 PAL2, ATPAL2 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.02863 No alias not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.02411 AT14A not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.03384 bHLH13, bHLH013, JAM2 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.02605 No alias not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.04061 PAL2, ATPAL2 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009890 negative regulation of biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009892 negative regulation of metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0010629 negative regulation of gene expression IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0031047 regulatory ncRNA-mediated gene silencing IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0031324 negative regulation of cellular metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0042254 ribosome biogenesis IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044085 cellular component biogenesis IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0046914 transition metal ion binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0048519 negative regulation of biological process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0048523 negative regulation of cellular process IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR025558 DUF4283 183 325
IPR026960 RVT-Znf 820 904
No external refs found!