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  5. Spov3_chr6.02827

Spov3_chr6.02827


Description : not classified


Gene families : OG0001414 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001414_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr6.02827


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004843 cysteine-type deubiquitinase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006397 mRNA processing IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0010215 cellulose microfibril organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016579 protein deubiquitination IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019783 ubiquitin-like protein peptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0030198 extracellular matrix organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043062 extracellular structure organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043687 post-translational protein modification IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0045229 external encapsulating structure organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0070646 protein modification by small protein removal IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0070647 protein modification by small protein conjugation or removal IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0101005 deubiquitinase activity IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_rpt 799 829
IPR002885 Pentatricopeptide_rpt 449 478
IPR002885 Pentatricopeptide_rpt 694 725
IPR002885 Pentatricopeptide_rpt 485 515
IPR002885 Pentatricopeptide_rpt 628 676
IPR002885 Pentatricopeptide_rpt 383 431
IPR002885 Pentatricopeptide_rpt 562 606
IPR002885 Pentatricopeptide_rpt 279 327
IPR002885 Pentatricopeptide_rpt 732 781
IPR002885 Pentatricopeptide_rpt 525 555
IPR002885 Pentatricopeptide_rpt 212 240
IPR002885 Pentatricopeptide_rpt 248 274
IPR002885 Pentatricopeptide_rpt 352 379
No external refs found!