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  5. Spov3_chr6.02468

Spov3_chr6.02468 (URGT6)


Aliases : URGT6

Description : not classified


Gene families : OG0000077 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000077_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr6.02468
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_669

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0447.00001 ATSAP18, SAP18 associated component *(SAP18) of histone deacetylase machineries 0.1 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C0801.00001 ATSAP18, SAP18 associated component *(SAP18) of histone deacetylase machineries 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.02310 ATSAP18, SAP18 associated component *(SAP18) of histone deacetylase machineries 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.02927 CHA18, CHR18 not classified 0.11 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.03416 ATSAP18, SAP18 associated component *(SAP18) of histone deacetylase machineries 0.11 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.02126 ATSAP18, SAP18 associated component *(SAP18) of histone deacetylase machineries 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.03469 ATSAP18, SAP18 associated component *(SAP18) of histone deacetylase machineries 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.01237 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Spinacia oleracea GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!