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  5. Spov3_chr6.02346

Spov3_chr6.02346 (PICALM2a)


Aliases : PICALM2a

Description : not classified


Gene families : OG0002587 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002587_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr6.02346

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr6.01894 No alias not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004519 endonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004521 RNA endonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004540 RNA nuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004659 prenyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005741 mitochondrial outer membrane IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008318 protein prenyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016849 phosphorus-oxygen lyase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0018342 protein prenylation IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0031968 organelle outer membrane IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0033897 ribonuclease T2 activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0097354 prenylation IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR025525 hAT-like_transposase_RNase-H 208 297
IPR008906 HATC_C_dom 324 403
No external refs found!