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  5. Spov3_chr6.02306

Spov3_chr6.02306 (RRT4)


Aliases : RRT4

Description : not classified


Gene families : OG0000705 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000705_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr6.02306
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_662

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr5.01172 No alias not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.01837 MUSE3, UFD2 not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.01838 CGLD27 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.01839 No alias not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.02109 TOM1, ATTOM1 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.00537 OTP90 not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.02307 No alias not classified 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004866 endopeptidase inhibitor activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005741 mitochondrial outer membrane IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009611 response to wounding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0019867 outer membrane IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0030414 peptidase inhibitor activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0031966 mitochondrial membrane IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0031968 organelle outer membrane IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0042254 ribosome biogenesis IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044085 cellular component biogenesis IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0061134 peptidase regulator activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0061135 endopeptidase regulator activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0098588 bounding membrane of organelle IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR005135 Endo/exonuclease/phosphatase 9 221
No external refs found!