Spov3_chr6.02301 (MSL8)

Aliases : MSL8

Description : mechanosensitive ion channel *(MSL)

Gene families : OG0003771 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0003771_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr6.02301
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_233

Target	Alias	Description	ECC score	Gene Family Method	Actions
Spov3_chr1.03539	MSL8	mechanosensitive ion channel *(MSL)	0.05	OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005643	nuclear pore	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0015934	large ribosomal subunit	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0017056	structural constituent of nuclear pore	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0044391	ribosomal subunit	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR006685	MscS_channel_2nd	137	249

External Links

No external refs found!