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  5. Spov3_chr6.01916

Spov3_chr6.01916 (VPS37-1)


Aliases : VPS37-1

Description : component *(VPS37) of ESCRT-I complex


Gene families : OG0000084 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000084_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr6.01916
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_645

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr1.01411 AtTZF5, TZF5 not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.02650 MAIL3 not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.01911 MAIL3 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008610 lipid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009719 response to endogenous stimulus IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009725 response to hormone IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009733 response to auxin IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0010033 response to organic substance IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0030001 metal ion transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0042221 response to chemical IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0046873 metal ion transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR009851 Mod_r 280 420
No external refs found!