- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : NUP82
Description : not classified
Gene families : OG0000011 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000011_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_chr5.04147 | |
| Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_55 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Spov3_C0001.00207 | EMB2788 | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0002.00057 | No alias | not classified | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0016.00023 | GTE8 | not classified | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0020.00031 | No alias | not classified | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_C0469.00001 | No alias | not classified | 0.11 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.01632 | No alias | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.02039 | No alias | not classified | 0.15 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr1.04357 | WAG2 | not classified | 0.12 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.02290 | No alias | not classified | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.02932 | RAPTOR1B,... | not classified | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.02971 | No alias | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.03235 | MAIL2 | not classified | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.03537 | GATA6 | not classified | 0.02 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.03873 | No alias | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.03882 | No alias | not classified | 0.12 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr2.05705 | No alias | not classified | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.00469 | No alias | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.00651 | CBE1 | not classified | 0.11 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.01125 | No alias | not classified | 0.12 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.01481 | No alias | not classified | 0.12 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.01494 | XLG2 | not classified | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.01510 | SPT5-1 | not classified | 0.12 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.01857 | RAPTOR1B,... | not classified | 0.11 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.02016 | No alias | not classified | 0.11 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.02101 | No alias | not classified | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.02387 | PKS18, SnRK3.6, CIPK20 | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.02641 | No alias | not classified | 0.15 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr3.02642 | WAG2 | not classified | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr4.00321 | No alias | not classified | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr4.01368 | No alias | not classified | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr4.02287 | No alias | not classified | 0.11 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr4.02542 | BAR1 | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr4.02556 | No alias | not classified | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.04076 | No alias | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.04137 | No alias | not classified | 0.08 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.04251 | No alias | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.04402 | No alias | not classified | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr5.04515 | No alias | not classified | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr6.02196 | HSFA6B, AT-HSFA6B | not classified | 0.12 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr6.02381 | No alias | not classified | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr6.02425 | No alias | not classified | 0.07 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr6.02914 | PKS18, SnRK3.6, CIPK20 | not classified | 0.11 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr6.03092 | EMB2788 | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr6.03128 | CRCK2 | not classified | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr6.03129 | BAR1 | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr6.03135 | No alias | not classified | 0.01 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr6.03149 | Hsp89.1,... | not classified | 0.09 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr6.03171 | ARO2 | not classified | 0.11 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
| Spov3_chr6.03205 | No alias | not classified | 0.12 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004066 | asparagine synthase (glutamine-hydrolyzing) activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006528 | asparagine metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006529 | asparagine biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006869 | lipid transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0008270 | zinc ion binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0015850 | organic hydroxy compound transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0015918 | sterol transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0019321 | pentose metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0019566 | arabinose metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0032365 | intracellular lipid transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0032366 | intracellular sterol transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0046373 | L-arabinose metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0046556 | alpha-L-arabinofuranosidase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0046907 | intracellular transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0051641 | cellular localization | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0051649 | establishment of localization in cell | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0071702 | organic substance transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |