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  5. Spov3_chr5.03339

Spov3_chr5.03339 (SRP34, ATSRP34, SR1,...)


Aliases : SRP34, ATSRP34, SR1, At-SR34, SR34

Description : RNA splicing factor *(SR30/34)


Gene families : OG0000455 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000455_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr5.03339
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_64

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr3.03203 SRP34, ATSRP34,... RNA splicing factor *(SR30/34) 0.09 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.02545 At-SR30, SR30, ATSRP30 RNA splicing factor *(SR30/34) 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.02682 ATERS, OVA3, ERS glutamyl-tRNA synthetase *(GluRS) 0.08 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0009767 photosynthetic electron transport chain IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016168 chlorophyll binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019684 photosynthesis, light reaction IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0022900 electron transport chain IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000504 RRM_dom 1 61
No external refs found!