Spov3_chr5.02258

Description : component *(bL36m) of large mitoribosomal-subunit proteome

Gene families : OG0071697 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr5.02258
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_106

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004180	carboxypeptidase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005667	transcription regulator complex	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005672	transcription factor TFIIA complex	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005743	mitochondrial inner membrane	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005750	mitochondrial respiratory chain complex III	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005751	mitochondrial respiratory chain complex IV	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006091	generation of precursor metabolites and energy	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006122	mitochondrial electron transport, ubiquinol to cytochrome c	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006260	DNA replication	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006310	DNA recombination	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006352	DNA-templated transcription initiation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006367	transcription initiation at RNA polymerase II promoter	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006397	mRNA processing	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008238	exopeptidase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009060	aerobic respiration	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0015980	energy derivation by oxidation of organic compounds	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0016071	mRNA metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0019646	aerobic electron transport chain	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0019866	organelle inner membrane	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0022900	electron transport chain	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0022904	respiratory electron transport chain	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0031090	organelle membrane	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0031966	mitochondrial membrane	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0032991	protein-containing complex	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0045275	respiratory chain complex III	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0045277	respiratory chain complex IV	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0045333	cellular respiration	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0070008	serine-type exopeptidase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0070069	cytochrome complex	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0090304	nucleic acid metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0090575	RNA polymerase II transcription regulator complex	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0098796	membrane protein complex	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0098798	mitochondrial protein-containing complex	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0098803	respiratory chain complex	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:1902494	catalytic complex	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:1902495	transmembrane transporter complex	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:1990204	oxidoreductase complex	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:1990351	transporter complex	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000473	Ribosomal_bL36	1	38

External Links

No external refs found!

Spov3_chr5.02258

Expression Profile

Co-expression Networks

Functional Annotation