Aliases : TOM1, ATTOM1
Description : not classified
Gene families : OG0000705 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000705_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_chr5.02109 | |
Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_29 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Spov3_chr5.01837 | MUSE3, UFD2 | not classified | 0.1 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr5.01838 | CGLD27 | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr5.01839 | No alias | not classified | 0.04 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr6.02306 | RRT4 | not classified | 0.06 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol | |
Spov3_chr6.02307 | No alias | not classified | 0.05 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004486 | methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0004488 | methylenetetrahydrofolate dehydrogenase (NADP+) activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0006787 | porphyrin-containing compound catabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0008134 | transcription factor binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0015994 | chlorophyll metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0015996 | chlorophyll catabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0016646 | oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0017025 | TBP-class protein binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0033015 | tetrapyrrole catabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0042440 | pigment metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
BP | GO:0046149 | pigment catabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0047746 | chlorophyllase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
MF | GO:0140296 | general transcription initiation factor binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
No InterPro domains available for this sequence
No external refs found! |