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  5. Spov3_chr5.02020

Spov3_chr5.02020 (CWC16a)


Aliases : CWC16a

Description : not classified


Gene families : OG0005836 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0005836_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr5.02020
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_960

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr2.03713 GH3.3 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.03120 CHR8 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.03121 ATKINESIN-13A,... not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003872 6-phosphofructokinase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006090 pyruvate metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006096 glycolytic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008270 zinc ion binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008443 phosphofructokinase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0015074 DNA integration IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019200 carbohydrate kinase activity IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000477 RT_dom 429 684
IPR026960 RVT-Znf 862 946
No external refs found!