1. Home
  2. Species
  3. Spinacia oleracea
  4. Sequence
  5. Spov3_chr5.01022

Spov3_chr5.01022


Description : not classified


Gene families : OG0001253 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001253_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr5.01022
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_125


Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0001671 ATPase activator activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005667 transcription regulator complex IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006289 nucleotide-excision repair IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006508 proteolysis IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006950 response to stress IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008150 biological_process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008152 metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008233 peptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019538 protein metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019842 vitamin binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0030151 molybdenum ion binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0030170 pyridoxal phosphate binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0050896 response to stimulus IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0060590 ATPase regulator activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0070279 vitamin B6 binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140096 catalytic activity, acting on a protein IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140677 molecular function activator activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901564 organonitrogen compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR045529 DUF6469 131 263
IPR041679 DNA2/NAM7-like_C 687 883
IPR041677 DNA2/NAM7_AAA_11 303 678
No external refs found!