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  5. Spov3_chr5.00086

Spov3_chr5.00086 (OEX2)


Aliases : OEX2

Description : plastidial RNA exonuclease


Gene families : OG0001696 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001696_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr5.00086


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004650 polygalacturonase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0005975 carbohydrate metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006720 isoprenoid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006721 terpenoid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006820 monoatomic anion transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008150 biological_process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008152 metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008299 isoprenoid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008610 lipid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009058 biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016114 terpenoid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0016459 myosin complex IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016744 transketolase or transaldolase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019842 vitamin binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0030170 pyridoxal phosphate binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044255 cellular lipid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046855 obsolete inositol phosphate dephosphorylation IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0070279 vitamin B6 binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR020045 DNA_polI_H3TH 239 327
IPR020046 5-3_exonucl_a-hlix_arch_N 84 216
No external refs found!