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  5. Spov3_chr4.04725

Spov3_chr4.04725 (PGX1)


Aliases : PGX1

Description : EC_3.2 glycosylase. polygalacturonase *(PGX1-like)


Gene families : OG0073714 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr4.04725
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_125


Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003993 acid phosphatase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004601 peroxidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004852 uroporphyrinogen-III synthase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005507 copper ion binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0005985 sucrose metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006082 organic acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006520 amino acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006979 response to oxidative stress IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0015035 protein-disulfide reductase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0015036 disulfide oxidoreductase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016157 sucrose synthase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016160 amylase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016161 beta-amylase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016209 antioxidant activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016491 oxidoreductase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016597 amino acid binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016836 hydro-lyase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019752 carboxylic acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0031406 carboxylic acid binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0033013 tetrapyrrole metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0033014 tetrapyrrole biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0043177 organic acid binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043436 oxoacid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 115 433
No external refs found!