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  5. Spov3_chr4.04110

Spov3_chr4.04110 (FEM111, AGL80)


Aliases : FEM111, AGL80

Description : not classified


Gene families : OG0000872 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000872_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr4.04110
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Spov3_chr3.00669 No alias not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.01868 No alias not classified 0.13 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr6.02272 FEM111, AGL80 not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006334 nucleosome assembly IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008146 sulfotransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0032993 protein-DNA complex IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034728 nucleosome organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0065004 protein-DNA complex assembly IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002156 RNaseH_domain 294 413
No external refs found!