Spov3_chr4.02284 (SAUR66)


Aliases : SAUR66

Description : not classified


Gene families : OG0000019 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000019_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr4.02284
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_103

Target Alias Description ECC score Gene Family Method Actions
Spov3_C0018.00054 AtOCT1 not classified 0.07 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_C1019.00001 SHBY not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_S06.00039 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.01171 AtOCT1 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.04348 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.01146 PMH2, ATRH53 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.03196 AtOCT1 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.03329 AtOCT1 not classified 0.05 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.03764 AtOCT1 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04197 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04333 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04627 No alias not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04650 No alias not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.04751 SAUR64 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.01582 AtHMP46 not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.01584 AtOCT1 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.02057 AtOCT1 not classified 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.02191 AR791 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.03747 AtHMP46 not classified 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.04003 GTD1, HAF01,... not classified 0.12 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.04175 No alias not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003678 DNA helicase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004386 helicase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006281 DNA repair IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006974 DNA damage response IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006996 organelle organization IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008094 ATP-dependent activity, acting on DNA IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032200 telomere organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0033554 cellular response to stress IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051276 chromosome organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051716 cellular response to stimulus IEP Spinacia oleracea GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!